fNIRS Analysis Pipeline

This documentation website gives instructions on how to import, process, and analyse functional NIRS data using NIRStorm.

Version 1.0.0

Authors

Rick Wassing, rick.wassing@sydney.edu.au, Woolcock Institute of Medical Research, The University of Sydney, Australia

Dependencies

• Matlab, including the Curve Fitting Toolbox and the Signal Processing Toolbox

• Brainstorm

• NIRStorm

Further Reading

This documentation will link to other webpages to describe steps that are already documented elsewhere. For example, to learn more about Brainstorm, see their documentation website.

Getting started

• Open Brainstorm
• Create a new protocol

Add raw file

• Add a raw fNIRS recording
• Convert event-markers

Preprocessing

• Visual inspection
• Preproc pipeline

Block average analysis

• Block average analysis